WormBase Tree Display for Variation: WBVar00115596

WBVar00115596 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00115596
    Other_name: cbs51117
    HGVSg: chrIII:g.9928146G>A
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2234
    Flanking_sequences: tttatgaatacaaataaagtctattcttgtcactttcttcaattggtgtt taatttaaaaaaaggagggcattaaaaaaagaaaataatttgcacaaaga
    Mapping_target: cb25.fpc2234
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: TTAA MseI, Tru1I, Tru9I 176 145 137 115 108 81 81 68 34 19 17 14 5
      Polymorphic_strain_digest: TTAA MseI, Tru1I, Tru9I 145 138 137 110 108 81 81 68 38 34 19 17 14 5 5
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00031616
    Transcript: CBG10153.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG10153.1:c.*4+19739G>A
        Intron_number: 5/5
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP