WormBase Tree Display for Variation: WBVar00116269

WBVar00116269 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00116269
    Other_name: cbs51790
      cb51790 Paper_evidence: WBPaper00055507
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2397
    Flanking_sequences: tcttccatttcaacgaaacattatt gcttgctcttcgttcgctcggaatc
    Mapping_target: cb25.fpc2397
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: AGCT AluI 327 290 246 119 18
        TTCGAA AsuII, Bpu14I, BsiCI, Bsp119I, BspT104I, BstBI, Csp45I, LspI, NspV, SfuI 536 347 117
        RGCY CviJI, CviTI 327 229 172 75 59 43 38 22 18 17
        TCGA EsaBC3I, TaqI, TthHB8I 398 268 137 106 80 11
        AATT Sse9I, TasI, Tsp509I, TspEI 163 146 115 108 107 95 77 76 37 24 21 17 9 5
      Polymorphic_strain_digest: AGCT AluI 327 276 246 119 18 14
        TTCGAA AsuII, Bpu14I, BsiCI, Bsp119I, BspT104I, BstBI, Csp45I, LspI, NspV, SfuI 653 347
        RGCY CviJI, CviTI 327 229 172 75 59 38 29 22 18 17 14
        TCGA EsaBC3I, TaqI, TthHB8I 409 268 137 106 80
        AATT Sse9I, TasI, Tsp509I, TspEI 163 146 115 108 107 95 77 57 37 24 21 19 17 9 5
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP