WormBase Tree Display for Variation: WBVar00116288

WBVar00116288 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00116288
    Other_name: cbs51809
    HGVSg: chrX:g.12272382A>G
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2397
    Flanking_sequences: aaaagagcagcacaaataagagctggctctcgggaagagctcgcgagaca gccacgtcaacaaactgtcactacctagtggttttcttctatgcgtttct
    Mapping_target: cb25.fpc2397
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: GCNNNNNNNGC BstMWI, HpyF10VI, MwoI 502 498
        RGCY CviJI, CviTI 463 406 57 19 17 13 13 8 4
      Polymorphic_strain_digest: GCNNNNNNNGC BstMWI, HpyF10VI, MwoI 1000
        RGCY CviJI, CviTI 463 406 58 19 17 13 12 8 4
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00032147
    Transcript: CBG10898.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG10898.1:c.28+713A>G
        Intron_number: 1/15
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP