WormBase Tree Display for Variation: WBVar00116302
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WBVar00116302 | Evidence | Paper_evidence | WBPaper00030778 | |||
---|---|---|---|---|---|---|
WBPaper00055507 | ||||||
Name | Public_name | WBVar00116302 | ||||
Other_name | cbs51823 | |||||
cb51823 | Paper_evidence | WBPaper00055507 | ||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc2397 | ||
Flanking_sequences | gtacaaatcatttgataattgacgc | cacacaaagttgttcattcttccga | ||||
Mapping_target | cb25.fpc2397 | |||||
Type_of_mutation | Substitution | A | T | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
RFLP | Reference_strain_digest | GTAC | AfaI, Csp6I, RsaI | 476 394 130 | ||
GATNNNNATC | BsaBI, Bse8I, BseJI, BsiBI, BsrBRI, MamI | 1000 | ||||
CAC | HindI | 148 146 119 92 85 79 68 49 45 44 33 26 26 24 10 2 2 2 | ||||
Polymorphic_strain_digest | GTAC | AfaI, Csp6I, RsaI | 606 394 | |||
GATNNNNATC | BsaBI, Bse8I, BseJI, BsiBI, BsrBRI, MamI | 522 478 | ||||
CAC | HindI | 148 146 119 92 85 79 68 49 45 44 33 28 26 24 10 2 2 | ||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis briggsae | ||||
Strain | WBStrain00041077 | |||||
Laboratory | CP | |||||
Person | WBPerson3706 | |||||
WBPerson227 | ||||||
WBPerson225 | ||||||
Status | Live | |||||
Reference | WBPaper00030778 | |||||
WBPaper00055507 | ||||||
Remark | Predicted by: ssaha-SNP v2.0 | |||||
This SNP was observed in 1 sequencing read(s) | ||||||
Method | SNP |