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WormBase Tree Display for Variation: WBVar00116376

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Name Class

WBVar00116376EvidencePaper_evidenceWBPaper00030778
NamePublic_nameWBVar00116376
Other_namecbs51897
Sequence_detailsSMapS_parentSequencecb25.fpc2397
Flanking_sequencesttgggagctctgcccctctttaagtgaatcttcaaagtcagaaaacacaccgaagcaggaaaaataaaaagggaggagaataagaaatgaaaagcaaaag
Mapping_targetcb25.fpc2397
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digestCTAGBfaI, MaeI, XspI633 159 147 61
CCNNNNNNNGGBsc4I, BseLI, BsiYI, BslI593 407
CACHindI171 72 61 61 60 58 57 50 41 40 37 36 29 27 26 23 21 20 18 17 16 15 10 10 8 4 2 2 2 2 2 2
TCTAGAXbaI634 305 61
Polymorphic_strain_digestCTAGBfaI, MaeI, XspI694 159 147
CCNNNNNNNGGBsc4I, BseLI, BsiYI, BslI505 407 88
CACHindI171 72 63 61 60 58 57 50 41 40 37 36 29 27 26 23 21 20 18 17 16 15 10 10 8 4 2 2 2 2 2
TCTAGAXbaI695 305
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
ReferenceWBPaper00030778
RemarkPredicted by: ssaha-SNP v2.0
This SNP was observed in 1 sequencing read(s)
MethodSNP