WormBase Tree Display for Variation: WBVar00116386
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WBVar00116386 | Evidence | Paper_evidence | WBPaper00030778 | |||
---|---|---|---|---|---|---|
WBPaper00055507 | ||||||
Name | Public_name | WBVar00116386 | ||||
Other_name | cbs51907 | |||||
cb51907 | Paper_evidence | WBPaper00055507 | ||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc2397 | ||
Flanking_sequences | ttatgacgcagaaaaatgaaaattc | tgggcaaagtttctagaagttcaaa | ||||
Mapping_target | cb25.fpc2397 | |||||
Type_of_mutation | Substitution | A | G | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
RFLP | Reference_strain_digest | CATG | CviAII, FatI, HpyCH4I, Hsp92II, NlaIII | 358 202 165 143 132 | ||
CAC | HindI | 166 124 121 111 72 58 57 55 52 50 49 37 25 14 9 | ||||
Polymorphic_strain_digest | CATG | CviAII, FatI, HpyCH4I, Hsp92II, NlaIII | 358 345 165 132 | |||
CAC | HindI | 166 124 121 111 58 57 55 52 50 49 39 37 33 25 14 9 | ||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis briggsae | ||||
Strain | WBStrain00041077 | |||||
Laboratory | CP | |||||
Person | WBPerson3706 | |||||
WBPerson227 | ||||||
WBPerson225 | ||||||
Status | Live | |||||
Reference | WBPaper00030778 | |||||
WBPaper00055507 | ||||||
Remark | Predicted by: ssaha-SNP v2.0 | |||||
This SNP was observed in 2 sequencing read(s) | ||||||
Method | SNP |