WormBase Tree Display for Variation: WBVar00118699

WBVar00118699 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00118699
    Other_name: cbs54220
      cb54220 Paper_evidence: WBPaper00055507
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2888a2
    Flanking_sequences: gatgttgaagagcccccaacgaccatttatccgaaagaacaaggttcgga aatacgataagtgcagtagaataattcagccaaacgacatgaaattttag
    Mapping_target: cb25.fpc2888a2
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: CGCG AccII, Bsh1236I, BstFNI, BstUI, FnuDII, MvnI, SelI, ThaI 1000
        GWGCWC Alw21I, AspHI, Bbv12I, BsiHKAI, HgiAI 786 214
        GRGCYC BanII, Eco24I, EcoT38I, FriOI, HgiJII 463 323 214
        GDGCHC BmyI, Bsp1286I, MhlI, SduI 463 323 214
        GAGCTC Ecl136II, EcoICRI, Psp124BI, SacI, SstI 784 216
        CAC HindI 6 2
        TCNGA Hpy188I 326 283 155 152 68 16
        AATT Sse9I, TasI, Tsp509I, TspEI 147 134 119 98 96 94 92 70 42 42 22 20 12 7 5
      Polymorphic_strain_digest: CGCG AccII, Bsh1236I, BstFNI, BstUI, FnuDII, MvnI, SelI, ThaI 754 246
        GWGCWC Alw21I, AspHI, Bbv12I, BsiHKAI, HgiAI 1000
        GRGCYC BanII, Eco24I, EcoT38I, FriOI, HgiJII 537 463
        GDGCHC BmyI, Bsp1286I, MhlI, SduI 537 463
        GAGCTC Ecl136II, EcoICRI, Psp124BI, SacI, SstI 1000
        CAC HindI 160 113 102 98 90 77 68 67 55 50 35 34 29 14 6 2
        TCNGA Hpy188I 435 326 155 68 16
        AATT Sse9I, TasI, Tsp509I, TspEI 147 134 110 98 96 94 92 70 42 42 22 20 12 9 7 5
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP