WormBase Tree Display for Variation: WBVar00118962

WBVar00118962 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00118962
    Other_name: cbs54483
    HGVSg: chrI:g.10352379G>C
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2888a2
    Flanking_sequences: tatctcgattccttcaaaagatatcagaaatctgtcaacgtaaaaaaata ttatcataatatcaccgatattttatcagttgacagttttttgatatctt
    Mapping_target: cb25.fpc2888a2
    Type_of_mutation: Substitution: G C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest (18)
      Polymorphic_strain_digest (18)
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00033677
    Transcript: CBG12785a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG12785a.1:c.344-107C>G
        Intron_number: 4/29
      CBG12785b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG12785b.1:c.344-107C>G
        Intron_number: 3/28
      CBG12785c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG12785c.1:c.344-107C>G
        Intron_number: 3/27
      CBG12785d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG12785d.1:c.344-107C>G
        Intron_number: 3/27
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP