WormBase Tree Display for Variation: WBVar00121243

WBVar00121243 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00121243
    Other_name: cbs56764
    HGVSg: chrX:g.9350503G>A
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc3857a
    Flanking_sequences: tagttgtagtatctcaaaaatcccttggttatttagtcttccagaaacat gatgaatacatccaactgaattgcgagaagctgataaatgaagagaagga
    Mapping_target: cb25.fpc3857a
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest (14)
      Polymorphic_strain_digest (14)
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00034897
    Transcript: CBG14374a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: CBG14374a.1:c.207C>T
        HGVSp: CBP09627.1:p.Ile69%3D
        cDNA_position: 305
        CDS_position: 207
        Protein_position: 69
        Exon_number: 4/5
        Codon_change: atC/atT
        Amino_acid_change: I
      CBG14374b.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: CBG14374b.1:c.215C>T
        HGVSp: CBP42662.1:p.Ser72Leu
        cDNA_position: 313
        CDS_position: 215
        Protein_position: 72
        Exon_number: 4/5
        Codon_change: tCg/tTg
        Amino_acid_change: S/L
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP