WormBase Tree Display for Variation: WBVar00121553
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WBVar00121553 | Evidence | Paper_evidence | WBPaper00030778 | |||
---|---|---|---|---|---|---|
WBPaper00055507 | ||||||
Name | Public_name | WBVar00121553 | ||||
Other_name | cbs57074 | |||||
cb57074 | Paper_evidence | WBPaper00055507 | ||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc3857a | ||
Flanking_sequences | gttcccattcttatcatatattttc | ctgtggtttacgtgataattttttg | ||||
Mapping_target | cb25.fpc3857a | |||||
Type_of_mutation | Substitution | T | G | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
RFLP | Reference_strain_digest | ACNGT | Bst4C, I, HpyCH4III, TaaI, Tsp4CI | 392 254 108 59 58 48 32 28 21 | ||
CAC | HindI | 136 131 85 81 77 59 59 54 41 40 39 23 22 21 18 17 15 13 10 9 9 8 6 6 5 4 3 3 2 2 2 | ||||
Polymorphic_strain_digest | ACNGT | Bst4C, I, HpyCH4III, TaaI, Tsp4CI | 392 254 108 76 59 58 32 21 | |||
CAC | HindI | 141 131 85 81 77 59 59 54 41 40 39 23 22 21 18 17 15 13 10 9 9 8 6 6 4 3 3 2 2 2 | ||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis briggsae | ||||
Strain | WBStrain00041077 | |||||
Laboratory | CP | |||||
Person | WBPerson3706 | |||||
WBPerson227 | ||||||
WBPerson225 | ||||||
Status | Live | |||||
Reference | WBPaper00030778 | |||||
WBPaper00055507 | ||||||
Remark | Predicted by: ssaha-SNP v2.0 | |||||
This SNP was observed in 1 sequencing read(s) | ||||||
Method | SNP |