WormBase Tree Display for Variation: WBVar00122228

WBVar00122228 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00122228
    Other_name: cbs57749
    HGVSg: chrIII:g.495148G>C
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc4010
    Flanking_sequences: tgcccttgtatcatgcctacgctagtcagcattgggccgtatgggctttg ctaacttgacgactaccgatggagaaaagtgggttttaagaatttttttt
    Mapping_target: cb25.fpc4010
    Type_of_mutation: Substitution: G C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: RGCY CviJI, CviTI 499 91 87 83 71 61 60 29 9 6 4
        TTAA MseI, Tru1I, Tru9I 413 245 151 126 65
      Polymorphic_strain_digest: RGCY CviJI, CviTI 505 91 87 83 71 61 60 29 9 4
        TTAA MseI, Tru1I, Tru9I 378 245 151 126 65 35
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00035501
    Transcript: CBG15177a.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: CBG15177a.1:c.2335G>C
        HGVSp: CBP47096.1:p.Ala779Pro
        cDNA_position: 2335
        CDS_position: 2335
        Protein_position: 779
        Exon_number: 7/10
        Codon_change: Gct/Cct
        Amino_acid_change: A/P
      CBG15177b.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: CBG15177b.1:c.2344G>C
        HGVSp: CBP42966.1:p.Ala782Pro
        cDNA_position: 2359
        CDS_position: 2344
        Protein_position: 782
        Exon_number: 8/10
        Codon_change: Gct/Cct
        Amino_acid_change: A/P
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP