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WormBase Tree Display for Variation: WBVar00124565

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Name Class

WBVar00124565EvidencePaper_evidenceWBPaper00030778
NamePublic_nameWBVar00124565
Other_namecbs60086
HGVSgchrV:g.16182961C>T
Sequence_detailsSMapS_parentSequencecb25.fpc4063
Flanking_sequencescacaggctctggaaatgtttttttttcagattttcagaatttcggaatctaaattattagaaaaaatcttacctacaagaaacacctcctaaatgaagct
Mapping_targetcb25.fpc4063
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digest (11)
Polymorphic_strain_digest (11)
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
AffectsGeneWBGene00303246
TranscriptCBG31307.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScCBG31307.1:c.59+23G>A
Intron_number2/7
ReferenceWBPaper00030778
RemarkPredicted by: ssaha-SNP v2.0
This SNP was observed in 1 sequencing read(s)
MethodSNP