WormBase Tree Display for Variation: WBVar00127117

WBVar00127117 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00127117
    Other_name: cbs62638
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc4126
    Flanking_sequences: attctagaccaaaaaaacggcgtgagttggtacgaccctagatgacccat gacctcagggagagtactataaaggaagagggaagtggagggaagaatca
    Mapping_target: cb25.fpc4126
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: AGCT AluI 333 148 113 94 48 12 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6
        RGCY CviJI, CviTI 269 148 113 94 48 22 22 12 7 7 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6
        TCGA EsaBC3I, TaqI, TthHB8I 500 500
      Polymorphic_strain_digest: AGCT AluI 333 148 113 94 48 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6
        RGCY CviJI, CviTI 269 148 113 94 48 22 22 7 7 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6
        TCGA EsaBC3I, TaqI, TthHB8I 1000
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP