WormBase Tree Display for Variation: WBVar00127164

WBVar00127164 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00127164
    Other_name: cbs62685
    HGVSg: chrV:g.12597126T>C
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc4126
    Flanking_sequences: agactctatcgaagccatgtggtgatggaaagacatggagcaataggttt taaaaagaattttgtaaagtttagattcattttccaggtactactatgat
    Mapping_target: cb25.fpc4126
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest (15)
      Polymorphic_strain_digest (15)
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00038328
    Transcript: CBG19048a.1 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: CBG19048a.1:c.3854+5T>C
        Intron_number: 19/30
      CBG19048b.1 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: CBG19048b.1:c.3776+5T>C
        Intron_number: 20/31
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP