WormBase Tree Display for Variation: WBVar00127182
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WBVar00127182 | Evidence | Paper_evidence | WBPaper00030778 | ||
---|---|---|---|---|---|
WBPaper00055507 | |||||
Name | Public_name | WBVar00127182 | |||
Other_name | cbs62703 | ||||
cb62703 | Paper_evidence | WBPaper00055507 | |||
HGVSg | chrV:g.12599859C>T | ||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc4126 | |
Flanking_sequences | cggatacaggttcatcacatcggga | ggttttcaaatctagttttttctaa | |||
Mapping_target | cb25.fpc4126 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | Reference_strain_digest (18) | ||||
Polymorphic_strain_digest (18) | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis briggsae | |||
Strain | WBStrain00041077 | ||||
Laboratory | CP | ||||
Person | WBPerson3706 | ||||
WBPerson227 | |||||
WBPerson225 | |||||
Status | Live | ||||
Affects | Gene | WBGene00038328 | |||
Transcript | CBG19048a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | CBG19048a.1:c.5768+17C>T | ||||
Intron_number | 30/30 | ||||
CBG19048b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | CBG19048b.1:c.5690+17C>T | ||||
Intron_number | 31/31 | ||||
Reference | WBPaper00030778 | ||||
WBPaper00055507 | |||||
Remark | Predicted by: ssaha-SNP v2.0 | ||||
This SNP was observed in 1 sequencing read(s) | |||||
Method | SNP |