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WormBase Tree Display for Variation: WBVar00127182

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Name Class

WBVar00127182EvidencePaper_evidenceWBPaper00030778
WBPaper00055507
NamePublic_nameWBVar00127182
Other_namecbs62703
cb62703Paper_evidenceWBPaper00055507
HGVSgchrV:g.12599859C>T
Sequence_detailsSMapS_parentSequencecb25.fpc4126
Flanking_sequencescggatacaggttcatcacatcgggaggttttcaaatctagttttttctaa
Mapping_targetcb25.fpc4126
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digest (18)
Polymorphic_strain_digest (18)
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
AffectsGeneWBGene00038328
TranscriptCBG19048a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScCBG19048a.1:c.5768+17C>T
Intron_number30/30
CBG19048b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScCBG19048b.1:c.5690+17C>T
Intron_number31/31
ReferenceWBPaper00030778
WBPaper00055507
RemarkPredicted by: ssaha-SNP v2.0
This SNP was observed in 1 sequencing read(s)
MethodSNP