WormBase Tree Display for Variation: WBVar00127229

WBVar00127229 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00127229
    Other_name: cbs62750
    HGVSg: chrV:g.12818874A>T
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc4126
    Flanking_sequences: ttagagagtcaaaaatagcagattttaggaacaagaaagcaaaacccaaa gacaatttccagatatcgtgcgctactagaacgtccagctctctacatat
    Mapping_target: cb25.fpc4126
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: RAATTY AcsI, ApoI, XapI 373 326 270 31
        AATT Sse9I, TasI, Tsp509I, TspEI 163 140 136 125 95 89 56 52 47 39 31 16 11
      Polymorphic_strain_digest: RAATTY AcsI, ApoI, XapI 373 357 270
        AATT Sse9I, TasI, Tsp509I, TspEI 163 140 136 125 95 89 78 56 52 39 16 11
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00038391
    Transcript: CBG19119.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG19119.1:c.342-13A>T
        Intron_number: 3/4
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP