WormBase Tree Display for Variation: WBVar00127254
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WBVar00127254 | Evidence | Paper_evidence | WBPaper00030778 | |||
---|---|---|---|---|---|---|
WBPaper00055507 | ||||||
Name | Public_name | WBVar00127254 | ||||
Other_name | cbs62775 | |||||
cb62775 | Paper_evidence | WBPaper00055507 | ||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc4126 | ||
Flanking_sequences | tagtaagtccgtgttttctgtgtag | gcgatgctaagcgatagcaaggaaa | ||||
Mapping_target | cb25.fpc4126 | |||||
Type_of_mutation | Substitution | A | T | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
RFLP | Reference_strain_digest | TGCA | CviRI, HpyCH4V | 443 330 123 104 | ||
CAC | HindI | 253 108 104 91 73 67 66 54 41 33 27 22 19 18 11 9 2 2 | ||||
AATT | Sse9I, TasI, Tsp509I, TspEI | 163 143 125 121 115 76 61 45 37 33 29 26 17 9 | ||||
Polymorphic_strain_digest | TGCA | CviRI, HpyCH4V | 483 290 123 104 | |||
CAC | HindI | 253 108 104 86 73 67 66 54 41 33 27 22 19 18 11 9 5 2 2 | ||||
AATT | Sse9I, TasI, Tsp509I, TspEI | 163 162 143 121 115 76 61 45 33 29 26 17 9 | ||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis briggsae | ||||
Strain | WBStrain00041077 | |||||
Laboratory | CP | |||||
Person | WBPerson3706 | |||||
WBPerson227 | ||||||
WBPerson225 | ||||||
Status | Live | |||||
Reference | WBPaper00030778 | |||||
WBPaper00055507 | ||||||
Remark | Predicted by: ssaha-SNP v2.0 | |||||
This SNP was observed in 1 sequencing read(s) | ||||||
Method | SNP |