WormBase Tree Display for Variation: WBVar00127280
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WBVar00127280 | Evidence | Paper_evidence | WBPaper00030778 | |||
---|---|---|---|---|---|---|
WBPaper00055507 | ||||||
Name | Public_name | WBVar00127280 | ||||
Other_name | cbs62801 | |||||
cb62801 | Paper_evidence | WBPaper00055507 | ||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc4126 | ||
Flanking_sequences | atgtttgaaaagctaggaggatcgt | cgaaaatgtgtaaactactaatccc | ||||
Mapping_target | cb25.fpc4126 | |||||
Type_of_mutation | Substitution | G | A | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
RFLP | Reference_strain_digest | GTAC | AfaI, Csp6I, RsaI | 853 91 56 | ||
CGTACG | BsiWI, Pfl23II, PspLI, SplI, SunI | 851 149 | ||||
CAC | HindI | 229 126 118 94 67 63 57 56 50 21 18 17 16 15 13 10 8 7 7 6 2 | ||||
Polymorphic_strain_digest | GTAC | AfaI, Csp6I, RsaI | 499 354 91 56 | |||
CGTACG | BsiWI, Pfl23II, PspLI, SplI, SunI | 497 354 149 | ||||
CAC | HindI | 229 136 118 94 67 63 57 56 50 21 18 17 16 15 13 8 7 7 6 2 | ||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis briggsae | ||||
Strain | WBStrain00041077 | |||||
Laboratory | CP | |||||
Person | WBPerson3706 | |||||
WBPerson227 | ||||||
WBPerson225 | ||||||
Status | Live | |||||
Reference | WBPaper00030778 | |||||
WBPaper00055507 | ||||||
Remark | Predicted by: ssaha-SNP v2.0 | |||||
This SNP was observed in 1 sequencing read(s) | ||||||
Method | SNP |