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WormBase Tree Display for Variation: WBVar00127280

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Name Class

WBVar00127280EvidencePaper_evidenceWBPaper00030778
WBPaper00055507
NamePublic_nameWBVar00127280
Other_namecbs62801
cb62801Paper_evidenceWBPaper00055507
Sequence_detailsSMapS_parentSequencecb25.fpc4126
Flanking_sequencesatgtttgaaaagctaggaggatcgtcgaaaatgtgtaaactactaatccc
Mapping_targetcb25.fpc4126
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digestGTACAfaI, Csp6I, RsaI853 91 56
CGTACGBsiWI, Pfl23II, PspLI, SplI, SunI851 149
CACHindI229 126 118 94 67 63 57 56 50 21 18 17 16 15 13 10 8 7 7 6 2
Polymorphic_strain_digestGTACAfaI, Csp6I, RsaI499 354 91 56
CGTACGBsiWI, Pfl23II, PspLI, SplI, SunI497 354 149
CACHindI229 136 118 94 67 63 57 56 50 21 18 17 16 15 13 8 7 7 6 2
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
ReferenceWBPaper00030778
WBPaper00055507
RemarkPredicted by: ssaha-SNP v2.0
This SNP was observed in 1 sequencing read(s)
MethodSNP