WormBase Tree Display for Variation: WBVar00127288

WBVar00127288 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00127288
    Other_name: cbs62809
      cb62809 Paper_evidence: WBPaper00055507
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc4126
    Flanking_sequences: gacaaataaacctcttttacacagt ctgtataccgcatttcgccgaggtt
    Mapping_target: cb25.fpc4126
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: RAATTY AcsI, ApoI, XapI 323 294 204 169 10
        GATC BfuCI, BscFI, Bsp143I, BstENII, BstKTI, ChaI, DpnI, DpnII, Kzo9I, MboI, NdeII, Sau3AI 586 227 152 35
        RGATCY BstX2I, BstYI, MflI, PsuI, XhoII 813 187
        CAC HindI 170 96 75 74 70 65 55 53 49 44 42 37 28 28 27 12 12 10 9 9 7 7 6 5 3 3 2 2
        TCNNGA Hpy178III, Hpy188III 618 193 183 6
      Polymorphic_strain_digest: RAATTY AcsI, ApoI, XapI 307 294 204 169 16 10
        GATC BfuCI, BscFI, Bsp143I, BstENII, BstKTI, ChaI, DpnI, DpnII, Kzo9I, MboI, NdeII, Sau3AI 621 227 152
        RGATCY BstX2I, BstYI, MflI, PsuI, XhoII 1000
        CAC HindI 170 96 75 74 70 65 55 49 44 42 37 31 28 28 27 22 12 12 10 9 9 7 7 6 5 3 3 2 2
        TCNNGA Hpy178III, Hpy188III 624 193 183
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 2 sequencing read(s)
  Method: SNP