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WormBase Tree Display for Variation: WBVar00127358

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Name Class

WBVar00127358EvidencePaper_evidenceWBPaper00030778
NamePublic_nameWBVar00127358
Other_namecbs62879
Sequence_detailsSMapS_parentSequencecb25.fpc4126
Flanking_sequencesctgggtaaaacattttttattattatgctggtatgtaaaaatcgtagctggaaagagaaacgccgatggccgtagctgaaggtcccacagcgaaaactac
Mapping_targetcb25.fpc4126
Type_of_mutationSubstitutionTG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digestCGCGAccII, Bsh1236I, BstFNI, BstUI, FnuDII, MvnI, SelI, ThaI756 244
CCGCAciI754 246
CCSGGAsuC2I, BcnI, CauII, EcoHI, NciI684 316
CCNGGBme1390I, BssKI, BstSCI, MspR9I, ScrFI450 316 234
CCGGBsiSI, HapII, HpaII, MspI403 317 178 102
CACHindI150 111 102 82 68 58 56 38 38 37 36 28 28 23 21 18 17 16 13 12 11 10 9 8 6 4
TCCNGGAPfoI682 318
Polymorphic_strain_digestCGCGAccII, Bsh1236I, BstFNI, BstUI, FnuDII, MvnI, SelI, ThaI685 244 71
CCGCAciI683 246 71
CCSGGAsuC2I, BcnI, CauII, EcoHI, NciI1000
CCNGGBme1390I, BssKI, BstSCI, MspR9I, ScrFI550 450
CCGGBsiSI, HapII, HpaII, MspI720 178 102
CACHindI150 118 111 102 68 58 56 38 38 37 28 28 23 21 18 17 16 13 12 11 10 9 8 6 4
TCCNGGAPfoI1000
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
ReferenceWBPaper00030778
RemarkPredicted by: ssaha-SNP v2.0
This SNP was observed in 1 sequencing read(s)
MethodSNP