WormBase Tree Display for Variation: WBVar00142769
expand all nodes | collapse all nodes | view schema
WBVar00142769 | Evidence | Paper_evidence | WBPaper00006123 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | cy6 | |||||
Other_name | Y71F9AR.1.1:c.1916C>G | ||||||
CE33243:p.Ser639Ter | |||||||
HGVSg | CHROMOSOME_I:g.2952314G>C | ||||||
Sequence_details | SMap | S_parent | Sequence | Y71F9AR | |||
Flanking_sequences | caccagttgccctctccacagcattcctgt | agaaaatcaaattgttcttgatatccagaa | |||||
Mapping_target | Y71F9AR | ||||||
Type_of_mutation | Substitution | c | r | Paper_evidence | WBPaper00006123 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00034912 | ||||||
Laboratory | TL | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00000237 | |||||
Transcript | Y71F9AR.1.1 | VEP_consequence | stop_gained | ||||
VEP_impact | HIGH | ||||||
HGVSc | Y71F9AR.1.1:c.1916C>G | ||||||
HGVSp | CE33243:p.Ser639Ter | ||||||
cDNA_position | 1959 | ||||||
CDS_position | 1916 | ||||||
Protein_position | 639 | ||||||
Exon_number | 8/15 | ||||||
Codon_change | tCa/tGa | ||||||
Amino_acid_change | S/* | ||||||
Genetics | Interpolated_map_position | I | -5.26975 | ||||
Description | Phenotype | WBPhenotype:0000632 | Paper_evidence | WBPaper00053043 | |||
Curator_confirmed | WBPerson35337 | ||||||
Reference | WBPaper00006123 | ||||||
WBPaper00053043 | |||||||
Method | Substitution_allele |