WormBase Tree Display for Variation: WBVar00145564

WBVar00145564 Evidence: Paper_evidence: WBPaper00038487
  Name: Public_name: gk157
    HGVSg
  Sequence_details: SMap: S_parent: Sequence: C27H5
    Flanking_sequences: actatttatgtagattttctgaagaaaatt tgttattgcacgcaatggatgaataatatt
    Mapping_target: C27H5
    Type_of_mutation: Insertion: CGCTGATTTTTGACTTTTTCNGNTCATTTCGGGGAANGAT
      Deletion
    PCR_product: gk157_external
      gk157_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00035644
    Laboratory: VC
    Person: WBPerson427
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00044938
      WBGene00003966
      WBGene00045090
    Transcript: C27H5.10 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        cDNA_position: 63-?
        Exon_number: 1/1
      C27H5.1.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2-3/5
        Exon_number: 1-3/6
      C27H5.9 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
  Isolation: Mutagen: UV/TMP
  Genetics: Mapping_data: In_multi_point: 4568
  Description: Phenotype (17)
    Phenotype_not_observed: WBPhenotype:0002469 Paper_evidence: WBPaper00038487
        Curator_confirmed: WBPerson712
        Remark: The probability and size of response to plate taps decreased with continued taps applied with a 10s interval, similar to the response of N2 animals. Paper_evidence: WBPaper00038487
            Curator_confirmed: WBPerson712
  Reference: WBPaper00038487
    WBPaper00043908
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele