WormBase Tree Display for Variation: WBVar00145840
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WBVar00145840 | Name | Public_name | gk434 | ||
---|---|---|---|---|---|
HGVSg | CHROMOSOME_II:g.7301807_7302386del | ||||
Sequence_details | SMap | S_parent | Sequence | F45E12 | |
Flanking_sequences | gacctactattataataaatacagttttat | aatgttcatcggtgggaagttttcagagtc | |||
Mapping_target | F45E12 | ||||
Type_of_mutation | Deletion | ||||
PCR_product | gk434_external | ||||
gk434_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00036264 | ||||
Laboratory | VC | ||||
Person | WBPerson427 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00000839 | |||
Transcript | F45E12.3.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | ||
VEP_impact | HIGH | ||||
Intron_number | 2-3/14 | ||||
Exon_number | 1-3/15 | ||||
Interactor | WBInteraction000009240 | ||||
WBInteraction000009241 | |||||
Isolation | Mutagen | TMP/UV | |||
Genetics | Mapping_data | In_multi_point | 5564 | ||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |