WormBase Tree Display for Variation: WBVar00145911

WBVar00145911 Name: Public_name: gk541
    HGVSg: CHROMOSOME_II:g.10539075_10539462delinsGATTAAACT
  Sequence_details: SMap: S_parent: Sequence: R166
    Flanking_sequences: cgaatttttatttgagaattgattaaactt ttaaaacaaaaacaacagaaaaagatcaac
    Mapping_target: R166
    Type_of_mutation: Insertion: GATTAAACT
      Deletion
    PCR_product: GK541_external
      GK541_internal
    SeqStatus: Sequenced
    Deletion_verification: PCR with one primer internal to the deletion and one external confirms that no WT copy of the gene remains. Person_evidence: WBPerson154
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036354
    Laboratory: VC
    Person: WBPerson427
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00011303
      WBGene00004185
    Transcript: R166.4.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 1688-?
        Exon_number: 6/6
      R166.3.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 1/5
        Exon_number: 1/6
  Isolation: Mutagen: UV/TMP
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele