WormBase Tree Display for Variation: WBVar00146221

WBVar00146221 Name: Public_name: gk1008
    Other_name: K12H6.12.1:c.544_1024-208del
    HGVSg: CHROMOSOME_II:g.2810654_2812226del
  Sequence_details: SMap: S_parent: Sequence: K12H6
    Flanking_sequences: tttcaatgtactgagtgcacatttgcgagt tcaatattttccattgttcttgatgctaaa
    Mapping_target: K12H6
    Type_of_mutation: Deletion
    PCR_product: GK1008_external
      GK1008_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00037141
    Laboratory: VC
    Person: WBPerson427
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00197071
      WBGene00197295
      WBGene00019691
    Transcript: K12H6.14 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
      K12H6.12.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: K12H6.12.1:c.544_1024-208del
        cDNA_position: 555-?
        CDS_position: 544-?
        Protein_position: 182-?
        Intron_number: 5-7/9
        Exon_number: 5-7/10
      K12H6.15 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
  Isolation: Mutagen: UV/TMP
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele