WormBase Tree Display for Variation: WBVar00146305

WBVar00146305 Name: Public_name: gk1219
    Other_name: Y79H2A.3e.1:c.375+120_871del
      Y79H2A.3c.1:c.375+120_871del
      Y79H2A.3f.1:c.375+120_871del
      Y79H2A.3d.1:c.375+120_871del
      Y79H2A.3a.1:c.375+120_871del
      Y79H2A.3b.1:c.375+120_871del
    HGVSg: CHROMOSOME_III:g.12050616_12051688del
  Sequence_details: SMap: S_parent: Sequence: Y79H2A
    Flanking_sequences: gttcatcaccagcattaatgagatatcgat tagctaattttgaaccgccataaaactttt
    Mapping_target: Y79H2A
    Type_of_mutation: Deletion
    PCR_product: gk1219_external
      gk1219_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00037559
    Laboratory: VC
    Person: WBPerson427
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00013580
    Transcript: Y79H2A.3e.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y79H2A.3e.1:c.375+120_871del
        cDNA_position: ?-871
        CDS_position: ?-871
        Protein_position: ?-291
        Intron_number: 3-5/28
        Exon_number: 4-6/29
      Y79H2A.3c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y79H2A.3c.1:c.375+120_871del
        cDNA_position: ?-881
        CDS_position: ?-871
        Protein_position: ?-291
        Intron_number: 4-6/17
        Exon_number: 5-7/18
      Y79H2A.3f.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y79H2A.3f.1:c.375+120_871del
        cDNA_position: ?-871
        CDS_position: ?-871
        Protein_position: ?-291
        Intron_number: 3-5/23
        Exon_number: 4-6/24
      Y79H2A.3d.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y79H2A.3d.1:c.375+120_871del
        cDNA_position: ?-884
        CDS_position: ?-871
        Protein_position: ?-291
        Intron_number: 4-6/29
        Exon_number: 5-7/30
      Y79H2A.3b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y79H2A.3b.1:c.375+120_871del
        cDNA_position: ?-871
        CDS_position: ?-871
        Protein_position: ?-291
        Intron_number: 3-5/16
        Exon_number: 4-6/17
      Y79H2A.3a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y79H2A.3a.1:c.375+120_871del
        cDNA_position: ?-881
        CDS_position: ?-871
        Protein_position: ?-291
        Intron_number: 4-6/29
        Exon_number: 5-7/30
  Isolation: Mutagen: UV/TMP
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele