WormBase Tree Display for Variation: WBVar00154289
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| WBVar00154289 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00154289 | |||
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_I:g.7435573G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | C44E1 | |
| Flanking_sequences | tgattcaaacaaaaaaatcgatagt | agcttcctataaattctggttttta | |||
| Mapping_target | C44E1 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01345247 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00006752 | |||
| Transcript | ZK524.2e.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK524.2e.1:c.1821+347G>A | ||||
| Intron_number | 13/29 | ||||
| ZK524.2c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK524.2c.1:c.798+347G>A | ||||
| Intron_number | 5/21 | ||||
| ZK524.2f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK524.2f.1:c.1830+347G>A | ||||
| Intron_number | 13/29 | ||||
| ZK524.2j.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK524.2j.1:c.1785+347G>A | ||||
| Intron_number | 13/28 | ||||
| ZK524.2k.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK524.2k.1:c.1776+347G>A | ||||
| Intron_number | 13/28 | ||||
| ZK524.2a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK524.2a.1:c.1821+347G>A | ||||
| Intron_number | 13/29 | ||||
| ZK524.2i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK524.2i.1:c.1830+347G>A | ||||
| Intron_number | 13/28 | ||||
| ZK524.2d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK524.2d.1:c.1821+347G>A | ||||
| Intron_number | 13/30 | ||||
| ZK524.2h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK524.2h.1:c.798+347G>A | ||||
| Intron_number | 5/20 | ||||
| Reference | WBPaper00037807 | ||||
| Remark | [20081124 db] this Variation was previously named hw7539 | ||||
| Method | WGS_Hawaiian_Waterston |
