WormBase Tree Display for Variation: WBVar00157735
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| WBVar00157735 | Name | Public_name | WBVar00157735 | ||
|---|---|---|---|---|---|
| Other_name (13) | |||||
| HGVSg | CHROMOSOME_I:g.11789623T>G | ||||
| Sequence_details | SMap | S_parent | Sequence | F53B8 | |
| Flanking_sequences | tgagacagagaaagagagagagaga | acgcagagaaaaccggcaacttgcg | |||
| Mapping_target | F53B8 | ||||
| Type_of_mutation | Substitution | T | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (22) | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson6900 | |||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Pasadena_Quinlan | |||||
| History | Acquires_merge | WBVar00539834 | |||
| WBVar00216166 | |||||
| WBVar01349959 | |||||
| WBVar01424457 | |||||
| WBVar01285531 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006876 | |||
| Transcript | ZK1151.1e.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK1151.1e.1:c.104-381A>C | ||||
| Intron_number | 2/16 | ||||
| ZK1151.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK1151.1b.1:c.545-381A>C | ||||
| Intron_number | 4/19 | ||||
| ZK1151.1f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK1151.1f.1:c.104-381A>C | ||||
| Intron_number | 1/15 | ||||
| ZK1151.1h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK1151.1h.1:c.104-381A>C | ||||
| Intron_number | 1/16 | ||||
| ZK1151.1c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK1151.1c.1:c.104-381A>C | ||||
| Intron_number | 2/31 | ||||
| ZK1151.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK1151.1a.1:c.914-381A>C | ||||
| Intron_number | 6/21 | ||||
| ZK1151.1k.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK1151.1k.1:c.104-381A>C | ||||
| Intron_number | 1/27 | ||||
| ZK1151.1j.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK1151.1j.1:c.104-381A>C | ||||
| Intron_number | 1/29 | ||||
| ZK1151.1d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK1151.1d.1:c.104-381A>C | ||||
| Intron_number | 1/16 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw10985 | ||||
| Method | WGS_Hawaiian_Waterston |
