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WormBase Tree Display for Variation: WBVar00182139

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Name Class

WBVar00182139NamePublic_nameWBVar00182139
Other_namepas31654
haw49415
haw147712
cewivar00029619
BE10.2.2:c.*16G>A
BE10.2.1:c.*16G>A
HGVSgCHROMOSOME_III:g.12793482C>T
Sequence_detailsSMapS_parentSequenceBE10
Flanking_sequencescctggaaagacaatggaaacaacaatctataaaaatcatattattgaaca
Mapping_targetBE10
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (25)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson6900
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
WGS_Pasadena_Quinlan
HistoryAcquires_mergeWBVar00567577
WBVar01273786
WBVar01338705
WBVar00219878
StatusLive
AffectsGeneWBGene00007210
TranscriptBE10.2.2VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScBE10.2.2:c.*16G>A
cDNA_position1694
Exon_number11/11
BE10.2.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScBE10.2.1:c.*16G>A
cDNA_position1572
Exon_number10/10
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw49415
MethodWGS_Hawaiian_Waterston