WormBase Tree Display for Variation: WBVar00182139
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WBVar00182139 | Name | Public_name | WBVar00182139 | ||
---|---|---|---|---|---|
Other_name | pas31654 | ||||
haw49415 | |||||
haw147712 | |||||
cewivar00029619 | |||||
BE10.2.2:c.*16G>A | |||||
BE10.2.1:c.*16G>A | |||||
HGVSg | CHROMOSOME_III:g.12793482C>T | ||||
Sequence_details | SMap | S_parent | Sequence | BE10 | |
Flanking_sequences | cctggaaagacaatggaaacaacaa | tctataaaaatcatattattgaaca | |||
Mapping_target | BE10 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (25) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar00567577 | |||
WBVar01273786 | |||||
WBVar01338705 | |||||
WBVar00219878 | |||||
Status | Live | ||||
Affects | Gene | WBGene00007210 | |||
Transcript | BE10.2.2 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | BE10.2.2:c.*16G>A | ||||
cDNA_position | 1694 | ||||
Exon_number | 11/11 | ||||
BE10.2.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | BE10.2.1:c.*16G>A | ||||
cDNA_position | 1572 | ||||
Exon_number | 10/10 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw49415 | ||||
Method | WGS_Hawaiian_Waterston |