WormBase Tree Display for Variation: WBVar00182253
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WBVar00182253 | Name | Public_name | WBVar00182253 | ||
---|---|---|---|---|---|
Other_name | haw49529 | ||||
haw147777 | |||||
cewivar00029729 | |||||
Y37D8A.6.2:c.-16+2280G>A | |||||
Y37D8A.6.3:c.-16+2280G>A | |||||
Y37D8A.8.1:c.115-40C>T | |||||
HGVSg | CHROMOSOME_III:g.12866944C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y37D8A | |
Flanking_sequences | aatgcgggaatatactctaaattcc | gcaattctcggagatcaaaccttat | |||
Mapping_target | Y37D8A | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | |||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | WGS_De_Bono | |||
Million_mutation_project_reanalysis | |||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00567642 | |||
WBVar01338815 | |||||
Status | Live | ||||
Affects | Gene | WBGene00012548 | |||
WBGene00012549 | |||||
Transcript | Y37D8A.6.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y37D8A.6.2:c.-16+2280G>A | ||||
Intron_number | 3/7 | ||||
Y37D8A.8.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y37D8A.8.1:c.115-40C>T | ||||
Intron_number | 2/5 | ||||
Y37D8A.6.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y37D8A.6.3:c.-16+2280G>A | ||||
Intron_number | 2/6 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw49529 | ||||
Method | WGS_Hawaiian_Waterston |