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WormBase Tree Display for Variation: WBVar00186390

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Name Class

WBVar00186390NamePublic_nameWBVar00186390
Other_namehaw53666
cewivar00203385
Y54G2A.11b.3:c.-481+432T>C
Y54G2A.11b.2:c.-481+432T>C
Y54G2A.11a.1:c.744+432T>C
Y54G2A.11b.1:c.-2121+432T>C
HGVSgCHROMOSOME_IV:g.2769174A>G
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencestggttgtagtgtaaatttgtaaaaaaaaaatcaaaaacttcaaggttttg
Mapping_targetY54G2A
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (16)
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021876
TranscriptY54G2A.11b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.11b.3:c.-481+432T>C
Intron_number1/5
Y54G2A.11b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.11b.1:c.-2121+432T>C
Intron_number3/6
Y54G2A.11a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.11a.1:c.744+432T>C
Intron_number4/7
Y54G2A.11b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.11b.2:c.-481+432T>C
Intron_number2/6
Remark[20081124 db] this Variation was previously named hw53666
MethodWGS_Hawaiian_Waterston