WormBase Tree Display for Variation: WBVar00186398

WBVar00186398 Evidence: Paper_evidence: WBPaper00038208
  Name: Public_name: WBVar00186398
    Other_name: haw53674
      haw150650
      cewivar00203388
      Y54G2A.42:n.684T>G
      Y54G2A.12.1:c.560-2269A>C
    HGVSg: CHROMOSOME_IV:g.2779794T>G
  Sequence_details: SMap: S_parent: Sequence: Y54G2A
    Flanking_sequences: gggacttaaaaaaccatacggccta gaacttgctcgtattggaagtatga
    Mapping_target: Y54G2A
    Type_of_mutation: Substitution: T G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (12)
    Laboratory: RW
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00570515
    Status: Live
  Affects: Gene: WBGene00044486
      WBGene00021877
    Transcript: Y54G2A.12.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.12.1:c.560-2269A>C
        Intron_number: 2/3
    Pseudogene: Y54G2A.42 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.42:n.684T>G
        cDNA_position: 684
        Exon_number: 1/3
  Reference: WBPaper00038208
  Remark: [20081124 db] this Variation was previously named hw53674
  Method: WGS_Hawaiian_Waterston