WormBase Tree Display for Variation: WBVar00186463

WBVar00186463 Name: Public_name: WBVar00186463
    Other_name: haw53739
      cewivar00203425
      Y54G2A.6a.1:c.-151-984G>A
      CE48894:p.Leu3=
      Y54G2A.49b.1:c.7C>T
    HGVSg: CHROMOSOME_IV:g.2853255G>A
  Sequence_details: SMap: S_parent: Sequence: Y54G2A
    Flanking_sequences: catgccaatattgttgaaattttta aagcatttttagaaataaatgttta
    Mapping_target: Y54G2A
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (17)
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00021872
      WBGene00044492
    Transcript: Y54G2A.49b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y54G2A.49b.1:c.7C>T
        HGVSp: CE48894:p.Leu3=
        cDNA_position: 10
        CDS_position: 7
        Protein_position: 3
        Exon_number: 2/5
        Codon_change: Cta/Tta
        Amino_acid_change: L
      Y54G2A.6a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.6a.1:c.-151-984G>A
        Intron_number: 1/6
  Remark: [20081124 db] this Variation was previously named hw53739
  Method: WGS_Hawaiian_Waterston