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WormBase Tree Display for Variation: WBVar00186514

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Name Class

WBVar00186514EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00186514
Other_namesnp_Y54G2A[25]
haw53790
cewivar00203529
Y54G2A.16b.1:c.72+1115C>T
HGVSgCHROMOSOME_IV:g.2863657G>A
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesaaacattactcaaaatttcagtagtcatatttccggagaggaaattaaaa
Mapping_targetY54G2A
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
SNP_Wicks
HistoryAcquires_mergeWBVar00247637
StatusLive
AffectsGeneWBGene00021881
TranscriptY54G2A.16b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.16b.1:c.72+1115C>T
Intron_number1/5
ReferenceWBPaper00004703
Remark[20081124 db] this Variation was previously named hw53790
MethodWGS_Hawaiian_Waterston