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WormBase Tree Display for Variation: WBVar00186555

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Name Class

WBVar00186555NamePublic_nameWBVar00186555
Other_namehaw53831
cewivar00203585
Y54G2A.17a.2:c.1180-1770T>A
Y54G2A.17a.1:c.1180-1770T>A
Y54G2A.17a.3:c.1180-1770T>A
Y54G2A.17b.1:c.1240-1770T>A
HGVSgCHROMOSOME_IV:g.2877153A>T
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesttgaaaacttctcaaaaaacagctagcatggctcaaaaagtggactaaaa
Mapping_targetY54G2A
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (15)
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021882
TranscriptY54G2A.17a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.3:c.1180-1770T>A
Intron_number4/7
Y54G2A.17b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17b.1:c.1240-1770T>A
Intron_number5/7
Y54G2A.17a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.2:c.1180-1770T>A
Intron_number5/8
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.1180-1770T>A
Intron_number5/8
Remark[20081124 db] this Variation was previously named hw53831
MethodWGS_Hawaiian_Waterston