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WormBase Tree Display for Variation: WBVar00186560

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Name Class

WBVar00186560EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00186560
Other_namehaw53836
haw150784
cewivar00203594
Y54G2A.17b.1:c.22+673A>G
Y54G2A.17a.2:c.-39+673A>G
Y54G2A.17a.1:c.-38-2221A>G
HGVSgCHROMOSOME_IV:g.2884562T>C
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesttgaaggaaaaaatacacaaaaattgggaaaatggtccagaatcatgtat
Mapping_targetY54G2A
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00006625From_analysisMillion_mutation_project_reanalysis
WBStrain00008273From_analysisMillion_mutation_project_reanalysis
WBStrain00022878From_analysisMillion_mutation_project_reanalysis
WBStrain00022899From_analysisMillion_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
WBStrain00023192From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00570649
StatusLive
AffectsGeneWBGene00021882
TranscriptY54G2A.17b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17b.1:c.22+673A>G
Intron_number2/7
Y54G2A.17a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.2:c.-39+673A>G
Intron_number1/8
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.-38-2221A>G
Intron_number1/8
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw53836
MethodWGS_Hawaiian_Waterston