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WormBase Tree Display for Variation: WBVar00186672

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Name Class

WBVar00186672EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00186672
Other_namehaw53948
haw150872
cewivar00036468
Y54G2A.28a.1:c.49-318A>T
Y54G2A.28b.1:c.88-318A>T
HGVSgCHROMOSOME_IV:g.3010498T>A
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencescacaagctttaatcttgttttttttaattgtttctggtgatttttcgtat
Mapping_targetY54G2A
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (20)
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00570737
StatusLive
AffectsGeneWBGene00021892
TranscriptY54G2A.28a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.28a.1:c.49-318A>T
Intron_number1/4
Y54G2A.28b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.28b.1:c.88-318A>T
Intron_number2/5
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw53948
MethodWGS_Hawaiian_Waterston