WormBase Tree Display for Variation: WBVar00187498
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| WBVar00187498 | Name | Public_name | WBVar00187498 | ||
|---|---|---|---|---|---|
| Other_name | haw54774 | ||||
| cewivar00037701 | |||||
| Y37E11C.1b.1:c.557+397C>G | |||||
| Y37E11C.1c.1:c.89+397C>G | |||||
| Y37E11C.1a.1:c.1082+397C>G | |||||
| HGVSg | CHROMOSOME_IV:g.3520169C>G | ||||
| Sequence_details | SMap | S_parent | Sequence | M57 | |
| Flanking_sequences | tttgagttaaaaatatagtttttcc | tggaaaattggtttttaatttaatg | |||
| Mapping_target | M57 | ||||
| Type_of_mutation | Substitution | C | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006769 | |||
| Transcript | Y37E11C.1c.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y37E11C.1c.1:c.89+397C>G | ||||
| Intron_number | 1/3 | ||||
| Y37E11C.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y37E11C.1b.1:c.557+397C>G | ||||
| Intron_number | 3/5 | ||||
| Y37E11C.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y37E11C.1a.1:c.1082+397C>G | ||||
| Intron_number | 7/10 | ||||
| Remark | [20081124 db] this Variation was previously named hw54774 | ||||
| Method | WGS_Hawaiian_Waterston |
