WormBase Tree Display for Variation: WBVar00190510
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| WBVar00190510 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00190510 | |||
| Other_name (13) | |||||
| HGVSg | CHROMOSOME_IV:g.7439873G>C | ||||
| Sequence_details | SMap | S_parent | Sequence | B0496 | |
| Flanking_sequences | ttcgtaatttttgaaacacgttttt | taaaagcactgacttatttgaatgg | |||
| Mapping_target | B0496 | ||||
| Type_of_mutation | Substitution | G | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00573348 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00006814 | |||
| Transcript | B0496.3h.2 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3h.2:c.3181-409G>C | ||||
| Intron_number | 17/27 | ||||
| B0496.3a.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3a.2:c.3250-409G>C | ||||
| Intron_number | 18/27 | ||||
| B0496.3b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3b.1:c.3445-409G>C | ||||
| Intron_number | 19/30 | ||||
| B0496.3i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3i.1:c.3496-409G>C | ||||
| Intron_number | 19/29 | ||||
| B0496.3g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3g.1:c.3181-409G>C | ||||
| Intron_number | 20/31 | ||||
| B0496.3a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3a.1:c.3250-409G>C | ||||
| Intron_number | 23/32 | ||||
| B0496.3e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3e.1:c.4090-409G>C | ||||
| Intron_number | 24/34 | ||||
| B0496.3f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3f.1:c.3298-409G>C | ||||
| Intron_number | 18/28 | ||||
| B0496.3h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3h.1:c.3181-409G>C | ||||
| Intron_number | 20/30 | ||||
| B0496.3d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3d.1:c.3373-409G>C | ||||
| Intron_number | 21/32 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw57786 | ||||
| Method | WGS_Hawaiian_Waterston |
