WormBase Tree Display for Variation: WBVar00206785
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| WBVar00206785 | Name | Public_name | WBVar00206785 | ||
|---|---|---|---|---|---|
| Other_name (15) | |||||
| HGVSg | CHROMOSOME_V:g.3699593A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | W08A12 | |
| Flanking_sequences | ggctggtgtcagctgtcgactggaa | aatttcggcaaattcgaggaattcg | |||
| Mapping_target | W08A12 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| WBStrain00031279 | From_analysis | WGS_Andersen | |||
| WBStrain00031284 | From_analysis | WGS_Andersen | |||
| Laboratory | RW | ||||
| QX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| WBPerson1730 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01458976 | |||
| WBVar00584097 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021078 | |||
| Transcript | W08A12.1b.3 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | W08A12.1b.3:c.819A>G | ||||
| HGVSp | CE28511:p.Lys273= | ||||
| cDNA_position | 851 | ||||
| CDS_position | 819 | ||||
| Protein_position | 273 | ||||
| Exon_number | 6/8 | ||||
| Codon_change | aaA/aaG | ||||
| Amino_acid_change | K | ||||
| W08A12.1a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | W08A12.1a.1:c.990A>G | ||||
| HGVSp | CE30205:p.Lys330= | ||||
| cDNA_position | 1035 | ||||
| CDS_position | 990 | ||||
| Protein_position | 330 | ||||
| Exon_number | 6/8 | ||||
| Codon_change | aaA/aaG | ||||
| Amino_acid_change | K | ||||
| W08A12.1c.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | W08A12.1c.1:c.801A>G | ||||
| HGVSp | CE30206:p.Lys267= | ||||
| cDNA_position | 1035 | ||||
| CDS_position | 801 | ||||
| Protein_position | 267 | ||||
| Exon_number | 6/8 | ||||
| Codon_change | aaA/aaG | ||||
| Amino_acid_change | K | ||||
| W08A12.1b.2 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | W08A12.1b.2:c.819A>G | ||||
| HGVSp | CE28511:p.Lys273= | ||||
| cDNA_position | 944 | ||||
| CDS_position | 819 | ||||
| Protein_position | 273 | ||||
| Exon_number | 7/9 | ||||
| Codon_change | aaA/aaG | ||||
| Amino_acid_change | K | ||||
| W08A12.1b.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | W08A12.1b.1:c.819A>G | ||||
| HGVSp | CE28511:p.Lys273= | ||||
| cDNA_position | 917 | ||||
| CDS_position | 819 | ||||
| Protein_position | 273 | ||||
| Exon_number | 7/9 | ||||
| Codon_change | aaA/aaG | ||||
| Amino_acid_change | K | ||||
| W08A12.1d.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | W08A12.1d.1:c.942A>G | ||||
| HGVSp | CE14696:p.Lys314= | ||||
| cDNA_position | 942 | ||||
| CDS_position | 942 | ||||
| Protein_position | 314 | ||||
| Exon_number | 4/6 | ||||
| Codon_change | aaA/aaG | ||||
| Amino_acid_change | K | ||||
| W08A12.1e.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | W08A12.1e.1:c.744A>G | ||||
| HGVSp | CE51676:p.Lys248= | ||||
| cDNA_position | 744 | ||||
| CDS_position | 744 | ||||
| Protein_position | 248 | ||||
| Exon_number | 4/5 | ||||
| Codon_change | aaA/aaG | ||||
| Amino_acid_change | K | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00040707 | |||||
| Remark | [20081124 db] this Variation was previously named hw74061 | ||||
| Method | WGS_Hawaiian_Waterston |
