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WormBase Tree Display for Variation: WBVar00206792

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Name Class

WBVar00206792EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00206792
Other_namehaw74068
haw164235
cewivar00229478
W08A12.1d.1:c.1353+540T>A
W08A12.1e.1:c.1155+540T>A
W08A12.1b.2:c.1230+540T>A
W08A12.1b.1:c.1230+540T>A
W08A12.1c.1:c.1212+540T>A
W08A12.1a.1:c.1401+540T>A
W08A12.1b.3:c.1230+540T>A
HGVSgCHROMOSOME_V:g.3700544T>A
Sequence_detailsSMapS_parentSequenceW08A12
Flanking_sequencesttaaaaaataagtttcaaaaaactttaaaaaaaccgctttttgaagaaat
Mapping_targetW08A12
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00584100
StatusLive
AffectsGeneWBGene00021078
TranscriptW08A12.1b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW08A12.1b.3:c.1230+540T>A
Intron_number6/7
W08A12.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW08A12.1a.1:c.1401+540T>A
Intron_number6/7
W08A12.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW08A12.1c.1:c.1212+540T>A
Intron_number6/7
W08A12.1b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW08A12.1b.2:c.1230+540T>A
Intron_number7/8
W08A12.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW08A12.1b.1:c.1230+540T>A
Intron_number7/8
W08A12.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW08A12.1d.1:c.1353+540T>A
Intron_number4/5
W08A12.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW08A12.1e.1:c.1155+540T>A
Intron_number4/4
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw74068
MethodWGS_Hawaiian_Waterston