WormBase Tree Display for Variation: WBVar00206800
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WBVar00206800 | Name | Public_name | WBVar00206800 | ||
---|---|---|---|---|---|
Other_name | haw74076 | ||||
cewivar00229486 | |||||
W08A12.1b.1:c.*187A>T | |||||
W08A12.1a.1:c.*187A>T | |||||
W08A12.1c.1:c.*187A>T | |||||
W08A12.1b.3:c.*187A>T | |||||
W08A12.1b.2:c.*187A>T | |||||
W08A12.1d.1:c.*187A>T | |||||
HGVSg | CHROMOSOME_V:g.3701528A>T | ||||
Sequence_details | SMap | S_parent | Sequence | W08A12 | |
Flanking_sequences | tgttttactttttttcagttttttt | ttttatttttttccacaaaactccc | |||
Mapping_target | W08A12 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00021078 | |||
Transcript | W08A12.1b.3 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1b.3:c.*187A>T | ||||
cDNA_position | 1554 | ||||
Exon_number | 8/8 | ||||
W08A12.1a.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1a.1:c.*187A>T | ||||
cDNA_position | 1738 | ||||
Exon_number | 8/8 | ||||
W08A12.1c.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1c.1:c.*187A>T | ||||
cDNA_position | 1738 | ||||
Exon_number | 8/8 | ||||
W08A12.1b.2 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1b.2:c.*187A>T | ||||
cDNA_position | 1647 | ||||
Exon_number | 9/9 | ||||
W08A12.1b.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1b.1:c.*187A>T | ||||
cDNA_position | 1620 | ||||
Exon_number | 9/9 | ||||
W08A12.1d.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1d.1:c.*187A>T | ||||
cDNA_position | 1645 | ||||
Exon_number | 6/6 | ||||
Remark | [20081124 db] this Variation was previously named hw74076 | ||||
Method | WGS_Hawaiian_Waterston |