WormBase Tree Display for Variation: WBVar00217559
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| WBVar00217559 | Name | Public_name | WBVar00217559 | ||
|---|---|---|---|---|---|
| Other_name | pas29335 | ||||
| haw146409 | |||||
| cewivar00026090 | |||||
| CE20253:p.Ile11= | |||||
| Y41C4A.13.1:c.33T>C | |||||
| HGVSg | CHROMOSOME_III:g.11737581A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | Y41C4A | |
| Flanking_sequences | agcctaagcctaagcttaagcctaagctaaagcctgagcccggaaattaaacttctttcaaaactgtacctggaggttaaagcagcattccttgttgagttctccacagcatttccagtagtggaagatgctagaggttccgcatttggttccgaccaatggtaccgggcaatatgtgtctccgtcctagaattttttagaaattttgaagatatataagaggaaaagtacctttgtagtggtgacctcattcactgcacttttcacgtcgtggtccacgttggcagccattgcgagtcc | atgcacgcggcgagtgcgatgtaggacatcattttgataggttaagctggaattttggattttagaatattgtgcaaaacgaaaagcgtttggaattcttagggagagaaaaaaaattagaaattttggcgggaaattgatattttatgagaaaatctttggcgggaaacttaaattttctcataaaactgtggctcggaactaaaattttcaatttaaaaatttggcgagaaactcaagttttttgaaaaatatttctggcgggaaattcaaatattctcaaaaaaatcttcggcggga | |||
| Mapping_target | Y41C4A | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (35) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01270609 | |||
| WBVar01335729 | |||||
| WBVar00566274 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00012759 | |||
| Transcript | Y41C4A.13.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y41C4A.13.1:c.33T>C | ||||
| HGVSp | CE20253:p.Ile11= | ||||
| cDNA_position | 47 | ||||
| CDS_position | 33 | ||||
| Protein_position | 11 | ||||
| Exon_number | 2/5 | ||||
| Codon_change | atT/atC | ||||
| Amino_acid_change | I | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
