WormBase Tree Display for Variation: WBVar00218647
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| WBVar00218647 | Name | Public_name | WBVar00218647 | ||
|---|---|---|---|---|---|
| Other_name | pas30423 | ||||
| cewivar00117855 | |||||
| F40E10.4.1:c.*88A>T | |||||
| HGVSg | CHROMOSOME_X:g.14683115A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F40E10 | |
| Flanking_sequences | ttctcaaataaagctgttattttctttcagaattgttgcactgctgtgaagaaaaagcagagaaaagtgaaaatgatatgcaaaaatggaacaacgtatgttagagaattcctagctcaaacaaatacttatttttccagaaaaatctccactgttcacattattcgtcagtgccaatgtgaacctacaaaaagtgttctctctgaaaagtgacaactttaaagtgaaaacaattatcccttgaactcctagatcctcgatttttgacatgtcatattccaattgtaatattatgttgtt | cttgtggggttgcttgaatagtcacttcaaccatacctaggcataaaaataaggccagttttcaattttcaagaaatgaacaactttttggagtacacagcaatttcacaaggaccactatattttatcaatttacgattcgaatttttatattttatttttcaatttccaaatccagattctcaacgataccacataaaacgtttgctttaccagattcttccttgccacgtcaattcactaattccacaaacgaaatgcaaatcccataatactaccccgatcgctgatttactgatc | |||
| Mapping_target | F40E10 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (12) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00004854 | |||
| Transcript | F40E10.4.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F40E10.4.1:c.*88A>T | ||||
| cDNA_position | 4368 | ||||
| Exon_number | 34/34 | ||||
| Method | WGS_Pasadena_Quinlan |
