WormBase Tree Display for Variation: WBVar00219884
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| WBVar00219884 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00219884 | |||
| Other_name | pas31660 | ||||
| cewivar00112334 | |||||
| BE10.2.1:c.1257-330T>A | |||||
| BE10.2.2:c.1257-330T>A | |||||
| HGVSg | CHROMOSOME_III:g.12794343A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | BE10 | |
| Flanking_sequences | tgaacggttcccacacacggttctgacttccctcatattttgaaatggaagagtttgccgaactaggccattttggctcgatcatatctggggtagatttacggcgcgttgcgtttatttgtccgtgtggagtacacgacattccggcagacgatggtcaatggagcgcgaaaaatgcaatgagcaaggcctgaacccggtgagcccaccgactttggaaatttcagcttttctgacaaaaatcgataaagaattacgttatcggaaattattgatttttttcttcaagatggaattata | tcagaaacgtttcatcagaaaatgtatatgttccgataaaaatcgataattagcaattattgatttttatcgagaaattacggatatcgctgtccattggaaatttctgagtttcgatatgaatatgagataggaaactagcaattcccgacaaaaatcgataaccgctacaaatattaaatcatcggaaattatcgattttttaagagaacgctacatatttgtgggacatacgcgacgccgtgagccgtccggcagcggcgcatatcagtgtacgctgccgctggcgcaggcgaatga | |||
| Mapping_target | BE10 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (19) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01273793 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00007210 | |||
| Transcript | BE10.2.2 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | BE10.2.2:c.1257-330T>A | ||||
| Intron_number | 8/10 | ||||
| BE10.2.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | BE10.2.1:c.1257-330T>A | ||||
| Intron_number | 7/9 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
