WormBase Tree Display for Variation: WBVar00219886
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WBVar00219886 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00219886 | |||
Other_name | pas31662 | ||||
cewivar00029630 | |||||
BE10.2.2:c.1256+410A>T | |||||
BE10.2.1:c.1256+410A>T | |||||
HGVSg | CHROMOSOME_III:g.12794739T>A | ||||
Sequence_details | SMap | S_parent | Sequence | BE10 | |
Flanking_sequences | attggaaatttctgagtttcgatatgaatatgagataggaaactagcaattcccgacaaaaatcgataaccgctacaaatattaaatcatcggaaattatcgattttttaagagaacgctacatatttgtgggacatacgcgacgccgtgagccgtccggcagcggcgcatatcagtgtacgctgccgctggcgcaggcgaatgaagtttgcgccggcgccaaaggatgcgccgccggatttcaagccccccttttagccgtttttttttaatgttttgatgtgaaattcgtgacttccg | cagaaattgatgattggcgaaaattggcaattatcgatttttatcgaataactacaaatatttctgtttcagcagaacttcagagttccaatacaaaattagcaatttctgacaaaaatcgataatcgccaaaagtactatatcttcgaaaattatcgattttttaagagaaagttacacatattgctgtttagctagcgctcgaaaaaatgaccgagatttgaaagcgctgtgacaaacgcgacgccgtgcgccggtggcggcagcgcatatcagtgtgcgctgccgctggcgcaagcg | |||
Mapping_target | BE10 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (20) | |||||
Laboratory | AX | ||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01273799 | |||
Status | Live | ||||
Affects | Gene | WBGene00007210 | |||
Transcript | BE10.2.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | BE10.2.2:c.1256+410A>T | ||||
Intron_number | 8/10 | ||||
BE10.2.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | BE10.2.1:c.1256+410A>T | ||||
Intron_number | 7/9 | ||||
Reference | WBPaper00037807 | ||||
Method | WGS_Pasadena_Quinlan |