WormBase Tree Display for Variation: WBVar00222362
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WBVar00222362 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00222362 | |||
Other_name | pas34138 | ||||
cewivar00029935 | |||||
F11F1.1b.1:c.89-61A>G | |||||
F11F1.1a.1:c.89-61A>G | |||||
HGVSg | CHROMOSOME_III:g.13396024A>G | ||||
Sequence_details | SMap | S_parent | Sequence | T03F6 | |
Flanking_sequences | atgagtattggtattgatttgggaactactttctcttgtgtagcttattatcaaaatggacaagtgaatatattggaaaatgagaatggtgaggctttttccacatggccgcaaaaacaagaaactcgcccgcaataatcatatcggtggcagagtttttgtaattttctagtcccaaaactaaccatgccgcagtcgactgtatggttgaatacgcagcgaacggctaaaattttatttcaatgcaaattggaattccattttgaacagaaaaaagcttgatatctgaaattaaaatct | agcaaagttctataccaaattctatgttatttgaaatgttagttacaaaaactgttccaggttgcagaacaaccccgtcagtcctagctgttggtgaggatggagatttacttataggtcaacatgcaaaagatgttatcggaaaggctactaactcactctttggtcagtgttatgtttaatggagctaagtaacactttacatcaatttgaaaattttcagacgttaaacgaataattggacggcgatatgatgacgttttacttcaaagggacatgccactttggccgtttaaagtt | |||
Mapping_target | T03F6 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (98) | |||||
Laboratory | AX | ||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01449871 | |||
WBVar01274136 | |||||
Status | Live | ||||
Affects | Gene | WBGene00008714 | |||
Transcript | F11F1.1a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F11F1.1a.1:c.89-61A>G | ||||
Intron_number | 2/8 | ||||
F11F1.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F11F1.1b.1:c.89-61A>G | ||||
Intron_number | 1/8 | ||||
Reference | WBPaper00037807 | ||||
Method | WGS_Pasadena_Quinlan |