WormBase Tree Display for Variation: WBVar00222917
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WBVar00222917 | Name | Public_name | WBVar00222917 | ||
---|---|---|---|---|---|
Other_name | pas34693 | ||||
cewivar00013299 | |||||
M03A1.1.1:c.95-866C>T | |||||
HGVSg | CHROMOSOME_II:g.4573256C>T | ||||
Sequence_details | SMap | S_parent | Sequence | M03A1 | |
Flanking_sequences | gagtctctctttattatttttcgaaccacacattgacatttgagaacacttcctcccggcaactgcctagagaagaagcccccggaccaatttgtttatacgggataggtgtcgcctgagagggggagagaggtttttgagtggtgtacgcggacatcctactcggattaccctactgttctgattgacacgacacctttgagcagaagctgacagggtcccggggtactctcgaattcctaccgtagacccggtcaatattgatgacttgtaaacctcgtctccttcccttgcgccttc | agagatacaaatcttttacaaatcggttccccttttggaaatgggaacccccgcgcgcctggcgcccagagatccttatcgtcgatgcatgcaccgtttagtcaccccaccaccgccacttttaacataataaatcacgggaaacatgcgtcctttttttttggagggccgttttaagtgtgaagtccttttgaaaccctcttccggcgattagtaccctttcgcgttttttatttgacgacgtggtgcctattcaattagtactagcttttggtgtgtgcgtgtggttcgctgagttca | |||
Mapping_target | M03A1 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (179) | |||||
Laboratory | QX | ||||
AX | |||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01305835 | |||
WBVar01371228 | |||||
WBVar01437537 | |||||
WBVar01239346 | |||||
Status | Live | ||||
Affects | Gene | WBGene00006868 | |||
Transcript | M03A1.1.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | M03A1.1.1:c.95-866C>T | ||||
Intron_number | 2/11 | ||||
Reference | WBPaper00040707 | ||||
WBPaper00037807 | |||||
Method | WGS_Pasadena_Quinlan |