WormBase Tree Display for Variation: WBVar00235382
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| WBVar00235382 | Name | Public_name | WBVar00235382 | ||
|---|---|---|---|---|---|
| Other_name | pas47158 | ||||
| T27A1.6.1:c.311+379del | |||||
| HGVSg | CHROMOSOME_II:g.517786del | ||||
| Sequence_details | SMap | S_parent | Sequence | T27A1 | |
| Flanking_sequences | ttgagattttgataatggaaaattttttcttaaaaaatacgatttttttttttgaaaatttgaaaatttcttttttttggaaaaagaaacggataaacccttttatctaaattacttgtttctttttctattttgttaccccatttcgagctaatttgtgaaaaaaggaagatcctctttgaccctctttatggacccccataaaggaggggtgtatactagttgtcacttagttaaatgagcttttttcgcgaattttcggaacattgtaggtgggaaaacacaaaaaaatggttagtt | aaaaaaagggaaattaggaaaaaactttttttttgaaatttacaaaacaattttttgagtcaaatttttttctgaaaatctataacaattactttttgaaggcttttttaaatgaattattaattttttgtactgtttttaaatatttactttaaagtttataagccaaatcgttgaaaattgtaaaaattaatttttaaaaagttactttttaatttcattaaaatattttgagagaatttaaattaaaaaaacaaatttttaaaattttgcatttttaggaaattctaattttttca | |||
| Mapping_target | T27A1 | ||||
| Type_of_mutation | Deletion | A | |||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | ||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00003106 | |||
| Transcript | T27A1.6.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T27A1.6.1:c.311+379del | ||||
| Intron_number | 4/10 | ||||
| Method | WGS_Pasadena_Quinlan |
