WormBase Tree Display for Variation: WBVar00237173
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WBVar00237173 | Name | Public_name | WBVar00237173 | ||
---|---|---|---|---|---|
Other_name | pas48949 | ||||
R12H7.1a.2:c.112+62del | |||||
R12H7.1a.1:c.112+62del | |||||
HGVSg | CHROMOSOME_X:g.13212605del | ||||
Sequence_details | SMap | S_parent | Sequence | R12H7 | |
Flanking_sequences | tagaacatcatccattctccatttctgcccgtatttttcatctcttgttttcccgtcatatccttacatcaaatttttttttcagatcggaaaaggcgctacgggcgccgtcacgacatgacttaggatgagtatgctattgtattatttcgcgagtgctgtgaagtcaatacagtttcacgtcgatgatgacattattgacaagcttaactactattacaccacagccattatcacaggtattcttttcttaaataaaatgtatcaaactttttgatgaaacatagcatactggtttac | aaaaaacacatgaaagagaaccgaaaaggtttaaaatgaaaataaatcttcatgaattagtacccattaaccaaggaccaaggacttgctctccctttcattttgttacatttttgatcaaagatgtttccaatcaagcatgtgtttctgaaccgttgggaagtattgaaatagaaaaagtttgaaataaatgttttgaaggagcttgaaatcaaaaaatcatttgataaaatagacattgaaaaagaaattcaacattaattatggcaattttgaagccataaaaaaacacgtctcta | |||
Mapping_target | R12H7 | ||||
Type_of_mutation | Deletion | A | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | ||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Status | Live | ||||
Affects | Gene | WBGene00006749 | |||
Transcript | R12H7.1a.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | R12H7.1a.2:c.112+62del | ||||
Intron_number | 3/10 | ||||
R12H7.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | R12H7.1a.1:c.112+62del | ||||
Intron_number | 2/9 | ||||
Method | WGS_Pasadena_Quinlan |